HMMER User's Guide

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HMMER User's Guide
Biological sequence analysis using profile hidden Markov models

http://hmmer.wustl.edu/
Version 2.0 beta; June 1998
(Preliminary draft)

Sean Eddy
Dept. of Genetics, Washington University School of Medicine
4566 Scott Ave., St. Louis, MO 63110, USA
eddy@genetics.wustl.edu
With contributions by Ewan Birney (birney@sanger.ac.uk)

Copyright (C) 1992-1998, Washington University in St. Louis.

Permission is granted to make and distribute verbatim copies of this manual provided the copyright notice and this permission notice are retained on all copies.

The HMMER software package is a copyrighted work that may be freely distributed and modified under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

See the Appendix for a copy of the full text of the GNU General Public License.